Title: Genomics in marine monitoring: new opportunities for assessing marine health status
Authors: BOURLAT Sarah J.BORJA AngelGILBERT JackTAYLOR Martin I.DAVIES NeilWEISBERG Stephen B.GRIFFITH JohnLETTIERI TeresaFIELD DawnBENZIE JohnGLÖCKNER Frank OliverRODRÍGUEZ-EZPELETA NaiaraFAITH Daniel PBEAN Tim P.OBST Matthias
Citation: MARINE POLLUTION BULLETIN vol. 74 no. 1 p. 13-31
Publisher: PERGAMON-ELSEVIER SCIENCE LTD
Publication Year: 2013
JRC N°: JRC82103
ISSN: 0025-326X
URI: http://www.sciencedirect.com/science/article/pii/S0025326X13002890
http://publications.jrc.ec.europa.eu/repository/handle/JRC82103
DOI: 10.1016/j.marpolbul.2013.05.042
Type: Articles in periodicals and books
Abstract: This viewpoint paper explores the potential of genomics technology to provide accurate, rapid, and cost efficient observations of the marine environment. The use of such approaches in next generation marine monitoring programs will help achieve the goals of marine legislation implemented world-wide. Genomic methods can yield faster results from monitoring, easier and more reliable taxonomic identification, as well as quicker and better assessment of the environmental status of marine waters. A summary of genomic methods that are ready or show high potential for integration into existing monitoring programs is provided (e.g. qPCR, SNP based methods, DNA barcoding, microarrays, metagenetics, metagenomics, transcriptomics). These approaches are mapped to existing indicators and descriptors and a series of case studies is presented to assess the cost and added value of these molecular techniques in comparison with traditional monitoring systems. Finally, guidelines and recommendations are suggested for how such methods can enter marine monitoring programs in a standardized manner.
JRC Directorate:Sustainable Resources

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